In this project, we design a methods to detect novel transcripts integrating ab initio prediction on genomic sequences and filtration with various RNA-seq data. 100 splice sites were selected and RT-PCR on 48 human tissues and cell lines (including a blank negative control) were conducted. The product of the same tissue or cell line were mixed and...

Complete ArcGIS dataset dump for demographic, health and administrative region boundaries describing ethnicity, demographics and cancer burden across a basket of diseases for NZ, ca 2008

Raw data used to generate figures for manuscript describing the in vitro and in vivo characterisation of a bioluminescent derivative of the bacterium Citrobacter rodentium. 

The above documents contain a collection of the 60 cross-sections of Happy Valley Stream, Kaikoura, New Zealand. The cross-sections depict 2, 50 and 100 year Annual return interval flood modelling within an alpine stream. Cross-sections have been extracted from DEMs of <0.055m resolution, obtained by way of Structure-from-Motion photogrammetry. The 58...

The data set also includes 18O and 2H values of rainfall and piezometer samples. This data set contains the soil and xylem water 18O and 2H values underlying the article "Tree water uptake in a tropical plantation varying in tree diversity: interspecific differences, seasonal shifts and complementarity" which was published in Ecohydrology in 2015 (DOI:...

This report describes changes in version 0.2 of the ‘DOM’ package for R. Version 0.1 of ‘DOM’ allowed HTML content to be added to a web page (or removed or modified); version 0.2 adds the ability to append SVG content to a web page.

This report describes changes in version 0.3 of the 'DOM' package for R. This version represents a major refactoring of the package code, including its user-facing API. These changes were made in order to facilitate the addition of new features to the package, which in this version include: a new way to refer to DOM nodes from R code that allows building...

Bioluminescence (relative light units [RLU] per well) of M. tuberculosis BSG001 (a stable bioluminescent derivative of H37Rv) growing as pellicles (floating biofilms), 7 days after exposure to different concentrations (Mg/L) of various common and experimental anti-tuberculosis treatments.

Raw data from our Resonant Ultrasound Experiments on man-man poly-crystalline ice.

Data to accompany Chapter 6 of the PhD thesis titled "Volumetric Characterisation of Contracting Cardiac Trabeculae"

This report describes changes in version 0.4 of the ‘DOM’ package for R. The main change in this version is the addition of new functions that allow control over the Cascading Style Sheet (CSS) content of a web page. This provides programmatic control over the styling of HTML and SVG content on a page.

A lightweight set of tools and a process to capture customer experience, and map service processes from a customer centric point of view.

sac files from school seismometers in the RU network used in our EJP publication to create figure 6.

a rotational scan as an example data set to illustrate palplots

This document describes a proof-of-concept for producing R demonstration videos in a fully-automated manner. The “script” for the video consists of a text file containing code chunks paired with text commentary. The video is produced by running the code while recording a screen capture, using text-to-speech software to record audio of the commentary, then...

inventory of seismic stations in the GeoNet network in New Zealand.

Small earthquake catalogue made (and later used) as part of an obspy tutorial

The SPSS data file containing all data collected from the TCoA-IIIA questionnaire administered in 2001 for primary schools. The AMOS data file is the confirmatory factor analysis input for the primary school TCoA-IIIA data set. Results were published in: Brown, G. T. L. (2006). Teachers’ conceptions of assessment: Validation of an abridged instrument....

The SPSS data file containing all data collected from TCoA-III Long questionnaire administered in 2002 for primary schools. The AMOS data file is the confirmatory factor analysis input for the primary school TCoA-III Long data set. Results were published in: Brown, G. T. L. (2002). Teachers’ conceptions of assessment. Unpublished doctoral dissertation,...

The SPSS data file containing abridged data information collected from the TCoA-III Long questionnaire administered in 2007 for secondary schools. The full questionnaire of 50 items was administered but only the abridged data was used for reporting. The AMOS data file is the confirmatory factor analysis input for the secondary school TCoA-IIIA data set....