Diamondback Terrapin rDNA unit sizes

Analysed_contigs file contains PacBio contigs from a whole genome assembly of the Diamondback terrapin(PRJNA339452) in FASTA format used to determine rDNA unit size for the Diamondback terrapin.Con_reads files contain raw nanopore reads individual rDNA unit sequences were extracted from to generate the consensus sequence in FASTA format.Con_indiv_units files contain individual rDNA unit sequences extracted from PacBio contigs used to generate the consensus sequence in FASTA format.Consensus_alignment files contains the alignement output in .geneious format.Annotated_Consensus files contains the two annotated consensus sequences in .geneious format.align_Diamondback_terrapin_con_with_ref file contains the rDNA consensus sequence aligned to a reference sequence (Genbank accession X02995).Average rDNA unit size was generated using the included excel spreadsheet.

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Data and Resources

Additional Info

Field Value
Theme
Author Emma Macdonald (9141500)
Maintainer
Source https://figshare.com/articles/dataset/Diamondback_Terrapin_rDNA_unit_sizes/14479221
Source Created 2021-04-27T08:14:24Z
Source Modified 2021-04-27T08:14:24
Language English
Spatial
Source Identifier 10.17608/k6.auckland.14479221.v1
Dataset metadata created 1 May 2021, last updated 28 March 2025